BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A03SP1|AL428992
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig476 1585 0.0
>3x_Contig476
Length = 2410
Score = 1585 bits (793), Expect = 0.0
Identities = 823/835 (98%), Gaps = 3/835 (0%)
Strand = Plus / Plus
Query: 1 atttcaccggattcgacgacaccgacacagtgttggataatgttacgcaatgggacatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 atttcaccggattcgacgacaccgacacagtgttggataatgttacgcaatgggacatca 1576
Query: 61 tctttcttaccagtcattttcttccaaagatgtactggaagatgaccccaagaacgtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 tctttcttaccagtcattttcttccaaagatgtactggaagatgaccccaagaacgtatt 1636
Query: 121 aattcttccacggagggaccgaag-cagcagaagcatcgacaccaacagcggtcaaatcg 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1637 aattcttccacggagggaccgaaggcagcagaagcatcgacaccaacagcggtcaaatcg 1696
Query: 180 ttgaaggcaacaccggaatcacctgattcaataccctggctgatttgagagttacgtaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 ttgaaggcaacaccggaatcacctgattcaataccctggctgatttgagagttacgtaag 1756
Query: 240 twatccaataaggctttcaaattgaaatccaattgatcaacttcaaacgattccatctgc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 taatccaataaggctttcaaattgaaatccaattgatcaacttcaaacgattccatctgc 1816
Query: 300 ttcttggtcttcgtagagatgactcttgccaaggattcgattctatcagcaccattttct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 ttcttggtcttcgtagagatgactcttgccaaggattcgattctatcagcaccattttct 1876
Query: 360 tgagacaagatggtagtgatttgacggggataattgagaagcagcattttgagattcgtt 419
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1877 tgagacaagatggtagtgatttgacggg-ataattgagaagcagcattttgagattcgtt 1935
Query: 420 atcctcttcgtaatggaaggaatttactgattgagcataggaatcagtagaatggatgga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 atcctcttcgtaatggaaggaatttactgattgagcataggaatcagtagaatggatgga 1995
Query: 480 atttcttccatcctcattagtcttacgacctgttgtcgattcagaagacatgacggkttc 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1996 atttcttccatcctcattagtcttacgacctgttgtcgattcagaagacatgacggtttc 2055
Query: 540 aaatgatacagatgaaaagatgtatcaatcaattaacagattaataggraattagcaatt 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2056 aaatgatacagatgaaaagatgtatcaatcaattaacagattaataggaaattagcaatt 2115
Query: 600 aacagcagtaactgggrtaaatattagacgatgtgaaaagtttataacaaaaaggkatca 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2116 aacagcagtaactgggataaatattagacgatgtgaaaagtttataacaaaaaggtatca 2175
Query: 660 gtaccaatagaaaaatattcgrttgaaaattaaatcttaaaacttggkattaaacgaact 719
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 2176 gtaccaatagaaaaatattcgattgaaaattaaatcttaaaacttggtattaaacgaact 2235
Query: 720 tagaaggktggrtattaattattacttctttgat-ccccaacaagtcttgtgaaagtgta 778
||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2236 tagaaggttggatattaattattacttctttgatcccccaacaagtcttgtgaaagtgta 2295
Query: 779 tttgttttctttgaactatttccttttcaatatgaatattgatcttgattgattg 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 tttgttttctttgaactatttccttttcaatatgaatattgatcttgattgattg 2350
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7150
Number of Sequences: 1807
Number of extensions: 7150
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)